AlzGene - Polymorphism Details
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 Study: Li, 2008
 Gene: SORL1  (GP250; LR11; LRP9; SorLA; SorLA-1)  Entrez Gene
 Protein: Sortilin-related receptor  (Sorting protein-related receptor containing LDLR class A repeats; SorLA; Low-density lipoprotein receptor relative with 11 ligand-binding repeats; LR11)  ProteinLink
 Chromosome: 11   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 18 April 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 17

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1010159 Canada AD
CTR
0.34
0.33
0.66
0.67
78 (0.112)
75 (0.109)
321 (0.462)
302 (0.438)
296 (0.426)
313 (0.454)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs11218340 Canada AD
CTR
0.07
0.07
0.93
0.93
0 (0.000)
3 (0.005)
90 (0.146)
80 (0.131)
527 (0.854)
527 (0.864)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs12364988 Canada AD
CTR
0.49
0.49
0.51
0.51
186 (0.272)
174 (0.256)
296 (0.432)
325 (0.478)
203 (0.296)
181 (0.266)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs1614735 Canada AD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs2276346 Canada AD
CTR
0.31
0.32
0.69
0.68
52 (0.080)
56 (0.086)
300 (0.459)
311 (0.476)
302 (0.462)
286 (0.438)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs2282649 Canada AD
CTR
0.29
0.27
0.71
0.73
54 (0.078)
58 (0.084)
287 (0.417)
258 (0.375)
347 (0.504)
372 (0.541)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4935774 Canada AD
CTR
0.25
0.26
0.75
0.74
51 (0.074)
45 (0.066)
238 (0.346)
260 (0.383)
399 (0.580)
374 (0.551)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele T-Allele A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
 Caucasian
rs560573 Canada AD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs668387 Canada AD
CTR
0.43
0.45
0.57
0.55
145 (0.210)
144 (0.211)
311 (0.449)
323 (0.474)
236 (0.341)
215 (0.315)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs1790213 Canada AD
CTR
0.39
0.37
0.61
0.63
95 (0.137)
99 (0.145)
345 (0.499)
305 (0.448)
252 (0.364)
277 (0.407)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs2101756 Canada AD
CTR
0.00
0.00
1.00
1.00
0 (0.000)
0 (0.000)
0 (0.000)
2 (0.003)
692 (1.000)
689 (0.997)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs2298525 Canada AD
CTR
0.10
0.10
0.90
0.90
6 (0.009)
6 (0.009)
127 (0.191)
125 (0.187)
532 (0.800)
538 (0.804)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs676759 Canada AD
CTR
0.39
0.41
0.61
0.59
107 (0.159)
108 (0.163)
313 (0.466)
322 (0.487)
251 (0.374)
231 (0.349)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs726601 Canada AD
CTR
0.31
0.29
0.69
0.71
63 (0.091)
61 (0.090)
299 (0.432)
267 (0.392)
330 (0.477)
353 (0.518)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs11218347 Canada AD
CTR
0.08
0.07
0.92
0.93
1 (0.001)
4 (0.006)
109 (0.158)
89 (0.130)
582 (0.841)
589 (0.864)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1629493 Canada AD
CTR
0.36
0.35
0.64
0.65
92 (0.133)
86 (0.126)
320 (0.462)
309 (0.454)
280 (0.405)
286 (0.420)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs7116734 Canada AD
CTR
0.40
0.40
0.60
0.60
104 (0.150)
111 (0.161)
344 (0.497)
328 (0.475)
244 (0.353)
252 (0.365)
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Studies: 1395
Genes: 695
Polymorphisms: 2973
Meta-analyses: 320
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