AlzGene - Polymorphism Details
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 Study: Bettens, 2008
 Gene: SORL1  (GP250; LR11; LRP9; SorLA; SorLA-1)  Entrez Gene
 Protein: Sortilin-related receptor  (Sorting protein-related receptor containing LDLR class A repeats; SorLA; Low-density lipoprotein receptor relative with 11 ligand-binding repeats; LR11)  ProteinLink
 Chromosome: 11   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 18 April 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 29

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1010159 Belgium AD
CTR
0.32
0.32
0.68
0.68
62 (0.114)
62 (0.098)
224 (0.413)
276 (0.435)
257 (0.473)
296 (0.467)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs11218304 Belgium AD
CTR
0.42
0.40
0.58
0.60
92 (0.182)
92 (0.146)
241 (0.477)
325 (0.514)
172 (0.341)
215 (0.340)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs11218340 Belgium AD
CTR
0.06
0.07
0.94
0.93
0 (0.000)
6 (0.009)
70 (0.128)
74 (0.117)
479 (0.872)
554 (0.874)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs1131497 Belgium AD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs1133174 Belgium AD
CTR
0.40
0.40
0.60
0.60
85 (0.168)
110 (0.174)
235 (0.465)
291 (0.460)
185 (0.366)
232 (0.367)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs11600231 Belgium AD
CTR
0.09
0.10
0.91
0.90
4 (0.007)
6 (0.009)
87 (0.158)
111 (0.175)
458 (0.834)
517 (0.815)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs12285364 Belgium AD
CTR
0.05
0.03
0.95
0.97
2 (0.004)
0 (0.000)
52 (0.097)
43 (0.068)
484 (0.900)
586 (0.932)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs12364988 Belgium AD
CTR
0.49
0.50
0.51
0.50
133 (0.264)
151 (0.239)
224 (0.444)
325 (0.513)
147 (0.292)
157 (0.248)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs1614735 Belgium AD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1699102 Belgium AD
CTR
0.30
0.31
0.70
0.69
56 (0.102)
55 (0.087)
219 (0.399)
279 (0.440)
274 (0.499)
300 (0.473)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1784933 Belgium AD
CTR
0.04
0.05
0.96
0.95
0 (0.000)
1 (0.002)
40 (0.080)
61 (0.097)
460 (0.920)
570 (0.902)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs2070045 Belgium AD
CTR
0.21
0.21
0.79
0.79
24 (0.044)
27 (0.043)
184 (0.335)
215 (0.339)
342 (0.622)
392 (0.618)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs2276346 Belgium AD
CTR
0.35
0.33
0.65
0.67
63 (0.116)
63 (0.100)
259 (0.475)
287 (0.454)
223 (0.409)
282 (0.446)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs2282649 Belgium AD
CTR
0.27
0.26
0.73
0.74
43 (0.078)
43 (0.068)
208 (0.380)
248 (0.391)
297 (0.542)
343 (0.541)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs2298813 Belgium AD
CTR
0.05
0.03
0.95
0.97
2 (0.004)
0 (0.000)
50 (0.091)
43 (0.068)
497 (0.905)
591 (0.932)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs3824966 Belgium AD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs3824968 Belgium AD
CTR
0.29
0.28
0.71
0.72
46 (0.085)
49 (0.078)
220 (0.407)
248 (0.396)
275 (0.508)
330 (0.526)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4935774 Belgium AD
CTR
0.21
0.24
0.79
0.76
18 (0.036)
33 (0.052)
177 (0.350)
241 (0.380)
311 (0.615)
360 (0.568)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs4935775 Belgium AD
CTR
0.45
0.43
0.55
0.57
117 (0.213)
106 (0.167)
265 (0.482)
335 (0.529)
168 (0.305)
192 (0.303)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs556349 Belgium AD
CTR
0.29
0.29
0.71
0.71
51 (0.093)
57 (0.090)
216 (0.393)
251 (0.397)
282 (0.514)
324 (0.513)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele T-Allele A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
 Caucasian
rs560573 Belgium AD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs578506 Belgium AD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs582446 Belgium AD
CTR
0.13
0.12
0.87
0.88
8 (0.015)
13 (0.021)
124 (0.226)
132 (0.209)
417 (0.760)
488 (0.771)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs641120 Belgium AD
CTR
0.42
0.45
0.58
0.55
96 (0.192)
107 (0.173)
232 (0.465)
339 (0.547)
171 (0.343)
174 (0.281)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs661057 Belgium AD
CTR
0.41
0.44
0.59
0.56
87 (0.173)
123 (0.194)
239 (0.474)
314 (0.496)
178 (0.353)
196 (0.310)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs668387 Belgium AD
CTR
0.42
0.45
0.58
0.55
101 (0.184)
110 (0.174)
260 (0.474)
348 (0.549)
188 (0.342)
176 (0.278)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs689021 Belgium AD
CTR
0.43
0.45
0.57
0.55
97 (0.192)
109 (0.172)
239 (0.472)
349 (0.550)
170 (0.336)
176 (0.278)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
SORL1-18ex26 Belgium AD
CTR
0.07
0.09
0.93
0.91
2 (0.004)
6 (0.010)
75 (0.137)
96 (0.152)
472 (0.860)
528 (0.838)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
SORL1-T833T Belgium AD
CTR
0.07
0.09
0.93
0.91
2 (0.004)
8 (0.013)
73 (0.133)
94 (0.148)
473 (0.863)
532 (0.839)
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