AlzGene - Polymorphism Details
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 Study: Miyashita, 2007
 Gene: VR22  (CTNNA3; MGC26194)  Entrez Gene
 Protein: catenin (cadherin-associated protein), alpha 3  (alpha-catenin-like protein)  ProteinLink
 Chromosome: 10   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 18 April 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 7

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Asian
rs7909676 Overlaps with Kuwano, 2006 AD
CTR		 0.50
0.47		 0.50
0.53		 356 (0.243)
344 (0.216)		 744 (0.507)
814 (0.510)		 368 (0.251)
438 (0.274)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs10822890 Overlaps with Kuwano, 2006 AD
CTR		 0.49
0.46		 0.51
0.54		 356 (0.239)
347 (0.211)		 748 (0.503)
833 (0.507)		 383 (0.258)
462 (0.281)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs10997307 Overlaps with Kuwano, 2006 AD
CTR		 0.36
0.35		 0.64
0.65		 193 (0.129)
213 (0.132)		 687 (0.459)
709 (0.438)		 617 (0.412)
697 (0.431)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele T-Allele G/G
(frequency)		 G/T
(frequency)		 T/T
(frequency)
 Asian
rs12258078 Overlaps with Kuwano, 2006 AD
CTR		 0.36
0.35		 0.64
0.65		 194 (0.129)
208 (0.128)		 691 (0.459)
721 (0.443)		 619 (0.412)
698 (0.429)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs2394287 Overlaps with Kuwano, 2006 AD
CTR		 0.49
0.46		 0.51
0.54		 346 (0.233)
333 (0.205)		 751 (0.506)
829 (0.511)		 388 (0.261)
459 (0.283)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs4459178 Overlaps with Kuwano, 2006 AD
CTR		 0.49
0.47		 0.51
0.53		 356 (0.244)
344 (0.213)		 722 (0.494)
822 (0.509)		 383 (0.262)
449 (0.278)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs713250 Overlaps with Kuwano, 2006 AD
CTR		 0.51
0.48		 0.49
0.52		 383 (0.258)
376 (0.230)		 746 (0.502)
827 (0.506)		 358 (0.241)
432 (0.264)
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1. APOE_e2/3/4
2. BIN1
3. CLU
4. ABCA7
5. CR1
6. PICALM
7. MS4A6A
8. CD33
9. MS4A4E
10. CD2AP
AlzGene Stats
Studies: 1395
Genes: 695
Polymorphisms: 2973
Meta-analyses: 320
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